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From
•>>December 2005
Eric Lagally answers
a few questions about this month's emerging research front
in
field of Chemistry:
Chemistry
Article: Fully integrated PCR-capillary electrophoresis microsystem for DNA analysis
Authors: Lagally,
ET;Emrich, CA;Mathies, RA
Journal: LAB CHIP, 1 (2): 102-107, 2001
Addresses:
Univ Calif Berkeley, UC Berkeley UC San Francisco Joint Bioengn Grad G, Berkeley, CA 94720 USA.
Univ Calif Berkeley, UC Berkeley UC San Francisco Joint Bioengn Grad G, Berkeley, CA 94720 USA.
Univ Calif Berkeley, UC Berkeley Biophys Grad Grp, Berkeley, CA 94720 USA.
Univ Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA.
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Why do you think your paper is
highly cited?
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“The paper describes novel methods for fabricating fully integrated
PCR-CE devices using glass substrates.”
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This paper describes a method for fully integrating
nanoliter-volume DNA amplification (PCR) with capillary
electrophoresis (CE) microchannels. It is the first paper to
demonstrate integration of microfabricated heaters and
temperature sensors within glass PCR-CE microsystems. These
devices operate rapidly, performing amplification and
separation in only 30 minutes. Finally, we demonstrate the
feasibility of performing forensic identification from human
genomic DNA in such systems, amplifying from only 10 ng of
template as might be found in actual forensic investigations.
Does it describe a new discovery or a new methodology
that's useful to others?
The paper describes novel methods for fabricating fully
integrated PCR-CE devices using glass substrates. The ability
to directly fabricate heaters and temperature sensors within
the device allows very rapid temperature transitions, up to 20
degrees C/second. The resulting systems can therefore perform
PCR and analyze the results within 30 minutes.
Could you summarize the significance of your paper in
layman's terms?
The fields of forensics, epidemiology, clinical
diagnostics, and many others all use DNA amplification as a
central method of sample preparation and experimentation.
Unfortunately, conventional methods for DNA amplification are
slow and cumbersome and the methods to analyze the results are
often slow and lack the resolution to discriminate closely
related outcomes. Rapid amplification of genetic material
directly combined with high-sensitivity analysis is therefore
a critical need in many areas of biological and medical
science. Our device accomplishes this combination in a single
microfabricated system. It is capable of analyzing very small
volumes (200 nanoliters, or two-tenths of a millionth of a
liter) and very low concentrations (down to about 1,000 DNA
molecules) of genetic material in only minutes, and is
therefore poised to contribute greatly to the fields mentioned
above.
How did you become involved in this research and were
there successes or failures?
I was lucky to have had a good high school education, one
facet of which was an excellent class in biotechnology. This
first interested me in DNA analysis. Later work in biology
laboratories as an undergraduate cemented my fascination with
this field, and I decided to pursue it in graduate school.
Overall, the work has been enormously successful—there are
always periods of frustration and setbacks in scientific
research, but working through these times usually helps point
the way forward.
What are the social or political implications of your
research?
I am hopeful that these systems can be used to contribute
to the equalization of health care around the world. There is
currently an urgent need for field-portable genetic analysis
systems, particularly in places where routine medical care is
lacking. Portable, low-power, and disposable systems would
allow medical personnel to diagnose and treat disease in one
visit, rather than the current system, which can result in
partial care or failed follow-up attempts. In more developed
countries, point-of-care medicine is also important, but it is
my hope that these systems can be extended to allow
personalized medicine, the idea of tailoring a treatment
regimen to the particular genetic and environmental make-up of
an individual patient. Such personalized medicine promises to
improve treatment outcomes through precise choice and dosage
of drugs, resulting in shorter recovery times and improved
quality of life.
"Non Nobis Solum Nati Sumus" (We are not
born for ourselves alone.) - Cicero, 44 BCE
Eric Lagally
California Nanosystems Institute
University of California, Santa Barbara
Santa Barbara, CA, USA
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