Beginning in mid-February 2008, the 1997-2007 online version of the Science Watch® newsletter, ESI-Topics.com, and in-cites.com, will all be featured together on the redesigned ScienceWatch.com. All previous content from the three sites will be permanently archived, and remain accessible from any existing bookmarks to the archived pages. No new content will be added to this site. Updates and new content (updated biweekly) are available at ScienceWatch.com now.

Fast Breaking Comments

By Jeremy Luban

ESI Special Topics, October 2006
Citing URL - http://www.esi-topics.com/fbp/2006/october06-JeremyLuban.html

Jeremy Luban answers a few questions about this month's fast breaking paper in the field of Microbiology.


From •>>October 2006

Field: Microbiology
Article Title: TRIM5 alpha selectively binds a restriction-sensitive retroviral capsid
Authors: Sebastian, S;Luban, J
Journal: RETROVIROLOGY
Volume: 2
Issue: 
Page: :art.
Year: no.-40 JUN 20 2005
* Columbia Univ Coll Phys & Surg, Dept Microbiol, 701 W 168th St,HHSC 1502, New York, NY 10032 USA.
* Columbia Univ Coll Phys & Surg, Dept Microbiol, New York, NY 10032 USA.
* Columbia Univ Coll Phys & Surg, Dept Med, New York, NY 10032 USA.

ST:  Why do you think your paper is highly cited?

Two years ago, TRIM5 was shown to be a potent, cytoplasmic inhibitor of infection by retroviruses, including HIV-1. Since then, there has been an explosion of papers providing genetic evidence that the carboxy-terminal SPRY domain of TRIM5alpha is required for specific recognition of the viral capsid. Our paper is the first to confirm this prediction using biochemical methods.

ST:  Does it describe a new discovery, methodology, or synthesis of knowledge?

“We have demonstrated that human cells possess a protein (TRIM5alpha) which has evolved to bind and inactivate the core of invading retroviruses.”

Conventional biochemical approaches by many groups failed to reveal TRIM5alpha binding to viral capsid. Sarah Sebastian, the graduate student who did the very clean and convincing experiments, demonstrated binding to TRIM5 in a SPRY-domain and capsid-specific manner by using intact virion cores. Sarah’s choice of experimental conditions was a successful synthesis of ideas and methods from the retrovirus biochemical literature.

ST:  Could you summarize the significance of your paper in layman's terms?

We have demonstrated that human cells possess a protein (TRIM5alpha) which has evolved to bind and inactivate the core of invading retroviruses.

ST:  How did you become involved in this research, and were any problems encountered along the way?

For about 15 years we have been attempting to identify host factors that regulate HIV-1 infection. Since our discovery 13 years ago that HIV-1 capsid interacts with a cellular protein called cyclophilin A, we have attempted to understand how this factor regulates HIV-1 infectivity.

In the course of these efforts, a screen of owl monkey cDNA by graduate student David Sayah discovered that HIV-1 infection is blocked by a TRIM5-cyclophilin A fusion protein expressed in this species (Nature 430:569). An independent screen by graduate student Matt Stremlau in the lab of Joe Sodroski discovered that rhesus macaque TRIM5alpha is an HIV-1 inhibitor (Nature 427:848).

ST:  Are there any social or political implications for your research?

Social: In 2006, AIDS is still a huge pandemic. Any information concerning virus replication or virus-host interactions has the potential to yield new treatments or preventive measures that might tilt the balance in a favorable direction.

Political: The experiments described above were funded by the NIH, through investigator-initiated RO1s. Until now, no country has been able to match the creative, independent research that has been possible in the USA. Current government policies concerning research funding, education, and immigration threaten to put an end to this proud tradition.End

Jeremy Luban, M.D.
Associate Professor Microbiology
Associate Professor of Medicine
Columbia University
New York, NY, USA

ESI Special Topics, October 2006
Citing URL - http://www.esi-topics.com/fbp/2006/october06-JeremyLuban.html

•> Search Special Topics
Fast Breaking Papers Menu || All Topics Menu
Fast Breaking Papers Comments Menu
Help || About || Contact

ScienceWatch.com - Tracking Trends and Perfomance in Basic Research
Go to the new ScienceWatch.com

Write to the Webmaster with questions/comments. Terms of Usage.
The Research Services Group of Thomson Scientific |
(c) 2008 The Thomson Corporation.