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ESI Special Topic: Malaria
Publication Date: November 2005

Malaria

ESI Special Topics: March 2006
Citing URL: http://esi-topics.com/malaria/interviews/AlanFCowman.html

 

An INTERVIEW with Professor Alan F. Cowman

In the interview below, Professor Alan Cowman talks about his highly cited work in malaria research. Two of his papers in particular have been singled out by Special Topics: "Dissecting apicoplast targeting in the malaria parasite Plasmodium falciparum," (Foth BJ, et al., Science 299[5607]: 705-8, 2003), which ranks #2 on the 2-year papers list in the Malaria Special Topic, and "Targeting malaria virulence and remodeling proteins to the host erythrocyte," (Marti M, et al., Science 306[5703]: 1930-33, 10 December 2004), which was selected this month as the New Hot Paper in Microbiology. In Essential Science Indicators, Professor Cowman’s record includes 57 papers cited a total of 1,873 times to date in Microbiology. He is the Head of the Division of Infection and Immunity at the Walter and Eliza Hall Institute of Medical Research in Melbourne, Australia.

ST:  What factors or circumstances led you to your work on protein targeting in malaria?

We are interested in the molecules that directly play a role in cytoadherence of P. falciparum-infected erythrocytes as well as the ancillary proteins as this is an important factor in pathogenesis of malaria. PfEMP1 is the important cytoadherence protein and we were keen to identify other proteins involved in assisting its function and also trafficking this protein to the surface of the erythrocyte. In order to do this, we needed to know how these proteins are trafficked out of the parasite and into the erythrocyte across two membranes. This led directly to identification of a motif required for this and the demonstration that most proteins trafficked to the host cell have this motif, and it is conserved throughout Plasmodia. We were then able to identify all proteins exported to the erythrocyte for the different Plasmodia species. It also provided us with the tools to start to dissect these proteins as we understood the information required to traffic them to their functional site in the erythrocyte.


Enlarge this photo


This work provides the means to understand how the malaria parasite is able to survive in the red blood cell and obtain nourishment and hide from the host defense systems.”
~Alan F. Cowman

So it really started from the need to know the sequence information for trafficking so that we could make genetic mutants in a way that the specific altered protein was still trafficked to its normal location.

ST:  Your 2004 Science paper was chosen as a "New Hot Paper" by Essential Science Indicators, and your 2003 Science paper ranks #2 on our listing of the most-cited malaria papers published in the past two years. Would you talk a little bit about how these papers are related (if at all), i.e., does the 2004 paper build on the discoveries in the 2003 paper, etc.?

The 2003 Science paper is from Geoff's McFadden group, and I played only a collaborative role in assisting them with their setup for genetically manipulating P. falciparum. The McFadden group is particularly interested in the function of the apicoplast and has used trafficking motifs to identify the proteins directed to this organelle.

They are actually not related at all in terms of their biology. The link is in the technology used to dissect the trafficking motifs and then using this bioinformatically to identify the relevant proteins.

ST:  Why do you think your 2004 Science paper is highly cited?

Because it answers a fundamental piece of biology with respect to an important pathogen. It also allowed the identification of a large number of proteins exported into the host cell. This has provided the means to analyze and determine the function of these proteins which are important for the parasite’s survival and the pathogenic effect it has on the host.

ST:  Does it describe a new discovery or a new methodology that's useful to others?

Yes, it has identified most if not all proteins exported into the host erythrocyte and this has activated a large amount of work to determine their function.

ST:  Could you summarize the significance of your paper in layman's terms?

This work provides the means to understand how the malaria parasite is able to survive in the red blood cell and obtain nourishment and hide from the host defense systems. It therefore has the potential to develop new treatments to interfere with these processes and the survival of the parasite.

ST:  How did this particular paper come into being, and were any problems encountered along the way?

We have been working on malaria for a long time and one of our aims is to understand how the parasite can survive in the human host. In order to accomplish this we wanted to make mutant parasites that lacked or expressed altered forms of particular proteins. To do this properly we needed to know how proteins were trafficked out into the red blood cell, and this led directly to this avenue of investigation.

ST:  What sorts of antimalarial treatments do you expect might be developed as a result of your protein targeting research?

A scanned electro microscopy shot of a red blood cell infected with malaria.

We are really discovering new biological features of the malaria parasite, and these are related to how they cause disease. Whilst any new treatments from this work are not even on the horizon we commenced it with the hope that we could identify potential new drug targets. The fact that we have been able to identify virtually all proteins exported by the different Plasmodia species to their respective host cell means that we could essentially compare their "exportomes." Comparison of them would help identify those that are conserved across the different species and are therefore functionally important and some of which may be potential drug targets.

ST:  Would they be preventative vaccines or more geared towards post-exposure cures, and will drug resistance be an issue?

It really is too early to talk about any possibilities with respect to this, but drug resistance will always be an issue in the development of any new drugs against a microbe.

ST:  If applicable, what are the social or political implications of your research?

Having identified all or most of the proteins exported by the malaria parasite we can now start to investigate their function, and this has important implications for the development of treatments to interfere with this process.

ST:  How has this research changed since you first started working in the field?

The biggest change has come from the availability of the genome sequence of a number of malaria parasites and it is resulting in a leap in our understanding of how the parasite infects humans and causes disease. The genome sequences has provided a huge amount of information and given us the ability to use the information we have gained in building the global picture of exported proteins in Plasmodia.

The second important change has come from the ability to genetically manipulate the parasite, a tool we have not had all that long compared with other areas of biology. It really has provided us with an important technological leap forward and opened many possibilities to dissect the parasite.

ST:  Where do you see this work going in 5 or 10 years?

I think it is an amazing time to be in malaria research, and science in general, because of the genome information and the increasing number of technological advances. The availability of the genome information from the human host as well as the mosquito vector and the malaria pathogens really is driving a revolution in understanding the parasite’s interaction with both the host and vector. Our ability to genetically manipulate the parasite will increase, and this will increase our ability to directly ask major questions relevant to infection and pathogenesis.End

Professor Alan Cowman
Head, Division of Infection and Immunity
The Walter and Eliza Hall Institute of Medical Research
Melbourne, Australia


New Hot Papers Comment
Professor Cowman's paper "Targeting malaria virulence and remodeling proteins to the host erythrocyte," has also been named the New Hot Paper in Immunology for March 2006.

ESI Special Topics: March 2006
Citing URL: http://esi-topics.com/malaria/interviews/AlanFCowman.html

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