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New Hot Paper Comments

By Rolf Apweiler

ESI Special Topics, November 2007
Citing URL - http://www.esi-topics.com/nhp/2007/november-07-RolfApweiler.html

Rolf Apweiler answers a few questions about this month's new hot paper in the field of Biology & Biochemistry.


From •>>November 2007

Field: Biology & Biochemistry
Article Title: The Universal Protein Resource (UniProt): an expanding universe of protein information
Authors: Wu, CH;Apweiler, R;Bairoch, A;Natale, DA;Barker, WC;Boeckmann, B;Ferro, S;Gasteiger, E;Huang, HZ;Lopez, R;Magrane, M;Martin, MJ;Mazumder, R;O'Donovan, C;Redaschi, N;Suzek, B
Journal: NUCL ACID RES
Volume: 34
Issue:
Page: :D187-D191
Year: Sp. Iss. SI JAN 1 2006
* Georgetown Univ, Med Ctr, Dept Biochem & Mol Biol, 3900 Reservoir Rd,NW, Washington, DC 20057 USA.
* Georgetown Univ, Med Ctr, Dept Biochem & Mol Biol, Washington, DC 20057 USA.
* European Bioinformat Inst, EMBL Outstn, Cambridge CB10 1SD, England.
* Univ Geneva, Med Ctr, Swiss Inst Bioinformat, CH-1211 Geneva, Switzerland.
* Natl Biomed Res Fdn, Washington, DC 20057 USA.

ST:  Why do you think your paper is highly cited?


“UniProt is a freely accessible information resource for life scientists and can be compared to the development and maintenance of a comprehensive and up-to-date encylopedia on proteins.”

The paper describes UniProt (Universal Protein Resource), which provides the life science community with a freely accessible, comprehensive high-quality resource on proteins. UniProt is a common development of three groups at the European Bioinformatics Institute (EBI), the Swiss Institute of Bioinformatics (SIB), and the Protein Information Resource (PIR). The UniProt databases are used by the majority of life science researchers and thus play an important role in research and development.

ST:  Does it describe a new discovery, methodology, or synthesis of knowledge?

It describes new services that are offered to users of the UniProt databases.

ST:  Would you summarize the significance of your paper in layman’s terms?

UniProt is a freely accessible information resource for life scientists and can be compared to the development and maintenance of a comprehensive and up-to-date encyclopedia on proteins.

ST:  How did you become involved in this research, and were there any particular problems encountered along the way?

I became involved in the development of Swiss-Prot, one of the databases that are now part of the UniProt resource, as a student in 1986. The biggest problem was, and still is, to keep pace with the dramatic development of biology, to adapt the databases to the changes, and to secure the necessary funding to do so.

ST:  Where do you see your research leading in the future?

In the future, we need to pay more attention to the incorporation of datasets from large-scale experiments into the UniProt databases.

ST:  Are there any social or political implications for your research?

The UniProt databases make the results of the scientific community in genome and protein research freely accessible world-wide to the scientific community and interested lay persons.End

Rolf Apweiler
Joint Head of Protein and Nucleotide Data (PANDA) Group
EMBL Outstation - Hinxton
European Bioinformatics Institute
Wellcome Trust Genome Campus
Hinxton
Cambridge, UK

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ESI Special Topics, November 2007
Citing URL - http://www.esi-topics.com/nhp/2007/november-07-RolfApweiler.html

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