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Stem Cells (2007) Menu

ESI Special Topics, November 2007
Citing URL: http://esi-topics.com/stemcells2007/rf/rf3.html

Stem Cells (2007)

RESEARCH FRONT  MAPS  | Map methodology

Stem Cells Research Front Maps

    Map Title:
Map 1 CULTURING HUMAN EMBRYONIC STEM CELLS
Alberto Hayek discusses his featured Research Front Map paper (locate paper in map), Beattie GM, et al., "Activin A maintains the plruipotency of human embryonic stem cells in the absence of feeder layers," Stem Cells 23(4): 489-95 April 2005.
(Added November 2007)
Outi Hovatta comments on his featured Research Front Map paper (locate paper in map), Hovatta O, et al., "A culture system using human foreskin fibroblasts as feeder cells allows production of human embryonic stem cells," Hum. Reprod. 18(7): 1404-9, July 2003.
(Added December 2007)
An interview with Chunhui Xu who discusses his paper (locate paper in map), Xu CH, et al., "Basic fibroblast growth factor supports undifferentiated human embryonic stem cell growth without conditioned medium," Stem Cells 23(3): 315-23, March 2005.
(Added December 2007)
Map 2 STEM-CELLS FOR MYOCARDIAL REGENERATION
Map 3 »»» REGULATION OF EMBRYONIC STEM CELLS
Map 4 CANCER STEM CELLS

Rodda-2005 Boyer-2005 Cao-2005 Meshorer-2006 Vire-2006 Sanchez-Eisner-2006 Loh-2006 McGarvey-2006 Lee-2006 Grimaud-2006 Bracken-2006 Azuara-2006 Boyer-2006 Negre-2006 Tolhuis-2006 Schwartz-2006 Petruk-2006 Schwartz-2007 Widschwendter-2007 Ohm-2007
 REGULATION OF EMBRYONIC STEM CELLS  


 Core Papers 


Label: Boyer-2005
Title: Core transcriptional regulatory circuitry in human embryonic stem cells
Journal: CELL, 122 (6): 947-956 SEP 23 2005
Citations: 175
Authors: Boyer, LA;Lee, TI;Cole, MF;Johnstone, SE;Levine, SS;Zucker, JR;Guenther, MG;Kumar, RM;Murray, HL;Jenner, RG;Gifford, DK;Melton, DA;Jaenisch, R;Young, RA
Addresses:
Whitehead Inst Biomed Res, 9 Cambridge Ctr, Cambridge, MA 02142 USA
Whitehead Inst Biomed Res, Cambridge, MA 02142 USA
MIT, Dept Biol, Cambridge, MA 02139 USA
Harvard Univ, Howard Hughes Med Inst, Dept Mol & Cellular Biol, Cambridge, MA 02138 USA
MIT, CSAIL, Cambridge, MA 02139 USA
MIT, Broad Inst, Cambridge, MA 02139 USA
Harvard Univ, Broad Inst, Cambridge, MA 02139 USA


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Label: Lee-2006
Title: Control of developmental regulator's by polycomb in human embryonic stem cells
Journal: CELL, 125 (2): 301-313 APR 21 2006
Citations: 93
Authors: Lee, TI;Jenner, RG;Boyer, LA;Guenther, MG;Levine, SS;Kumar, RM;Chevalier, B;Johnstone, SE;Cole, MF;Isono, K;Koseki, H;Fuchikami, T;Abe, K;Murray, HL;Zucker, JP;Yuan, BB;Bell, GW;Herbolsheimer, E;Hannett, NM;Sun, KM;Odom, DT;Otte, AP;Volkert, TL;Bartel, DP;Melton, DA;Gifford, DK;Jaenisch, R;Young, RA
Addresses:
Whitehead Inst Biomed Res, 9 Cambridge Ctr, Cambridge, MA 02142 USA
Whitehead Inst Biomed Res, Cambridge, MA 02142 USA
MIT, Dept Biol, Cambridge, MA 02139 USA
RIKEN, Ctr Allergy & Immunol, Dev Genet Grp, Tsurumi Ku, Yokohama, Kanagawa 2300045, Japan
RIKEN, Tsukuba Inst, BioResource Ctr, Technol & Dev Team Mammalian Cellular Dynam, Tsukuba, Ibaraki 2300045, Japan
Univ Amsterdam, Swammerdam Inst Life Sci, NL-1098 SM Amsterdam, Netherlands
Harvard Univ, Howard Hughes Med Inst, Dept Mol & Cellular Biol, Cambridge, MA 02138 USA
MIT, CSAIL, Cambridge, MA 02139 USA


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Label: Boyer-2006
Title: Polycomb complexes repress developmental regulators in murine embryonic stem cells
Journal: NATURE, 441 (7091): 349-353 MAY 18 2006
Citations: 82
Authors: Boyer, LA;Plath, K;Zeitlinger, J;Brambrink, T;Medeiros, LA;Lee, TI;Levine, SS;Wernig, M;Tajonar, A;Ray, MK;Bell, GW;Otte, AP;Vidal, M;Gifford, DK;Young, RA;Jaenisch, R
Addresses:
Whitehead Inst Biomed Res, 9 Cambridge Ctr, Cambridge, MA 02142 USA
Whitehead Inst Biomed Res, Cambridge, MA 02142 USA
MIT, Dept Biol, Cambridge, MA 02139 USA
Univ Amsterdam, Swammerdam Inst Life Sci, NL-1098 SM Amsterdam, Netherlands
CSIC, Dev & Cell Biol Ctr Invest Biol, E-28040 Madrid, Spain
MIT, Comp Sci Lab, Cambridge, MA 02139 USA
MIT, Artificial Intelligence Lab, Cambridge, MA 02139 USA


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Label: Loh-2006
Title: The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells
Journal: NAT GENET, 38 (4): 431-440 APR 2006
Citations: 74
Authors: Loh, YH;Wu, Q;Chew, JL;Vega, VB;Zhang, WW;Chen, X;Bourque, G;George, J;Leong, B;Liu, J;Wong, KY;Sung, KW;Lee, CWH;Zhao, XD;Chiu, KP;Lipovich, L;Kuznetsov, VA;Robson, P;Stanton, LW;Wei, CL;Ruan, YJ;Lim, B;Ng, HH
Addresses:
Genome Inst Singapore, Cloning & Sequencing Grp, Singapore 138672, Singapore
Genome Inst Singapore, Cloning & Sequencing Grp, Singapore 138672, Singapore
Genome Inst Singapore, Informat & Math Sci Grp, Singapore 138672, Singapore
Genome Inst Singapore, Gene Regulat Lab, Singapore 138672, Singapore
Natl Univ Singapore, Dept Biol Sci, Singapore 117543, Singapore
Harvard Univ, Sch Med, Harvard Inst Med, Boston, MA 02115 USA


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Label: Vire-2006
Title: The Polycomb group protein EZH2 directly controls DNA methylation
Journal: NATURE, 439 (7078): 871-874 FEB 16 2006
Citations: 61
Authors: Vire, E;Brenner, C;Deplus, R;Blanchon, L;Fraga, M;Didelot, C;Morey, L;Van Eynde, A;Bernard, D;Vanderwinden, JM;Bollen, M;Esteller, M;Di Croce, L;de Launoit, Y;Fuks, F
Addresses:
Free Univ Brussels, Fac Med, Mol Virol Lab, 808 Route Lennik, B-1070 Brussels, Belgium
Free Univ Brussels, Fac Med, Mol Virol Lab, B-1070 Brussels, Belgium
CNIO, Canc Epigenet Grp, Madrid 28029, Spain
ICREA, E-08003 Barcelona, Spain
CRG, E-08003 Barcelona, Spain
Katholieke Univ Leuven, Fac Geneeskunde, Div Biochem, B-3000 Louvain, Belgium
Free Univ Brussels, Fac Med, Neurophysiol Lab, B-1070 Brussels, Belgium
Univ Lille 1, Inst Biol Lille, Inst Pasteur Lille, CNRS,UMR 8117, F-59021 Lille, France


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Label: Rodda-2005
Title: Transcriptional regulation of Nanog by Oct4 and Sox2
Journal: J BIOL CHEM, 280 (26): 24731-24737 JUL 1 2005
Citations: 49
Authors: Rodda, DJ;Chew, JL;Lim, LH;Loh, YH;Wang, B;Ng, HH;Robson, P
Addresses:
Genome Inst Singapore, Gene Regulat Lab, 60 Biopolis St 02-01,Genome Bldg, Singapore 138672, Singapore
Genome Inst Singapore, Gene Regulat Lab, Singapore 138672, Singapore
Natl Univ Singapore, Dept Biol Sci, Singapore 117543, Singapore


[Back to Map]     

Label: Meshorer-2006
Title: Hyperdynamic plasticity in pluripotent embryonic of chromatin proteins stem cells
Journal: DEV CELL, 10 (1): 105-116 JAN 2006
Citations: 47
Authors: Meshorer, E;Yellajoshula, D;George, E;Scambler, PJ;Brown, DT;Mistell, T
Addresses:
NCI, NIH, Bethesda, MD 20892 USA
NCI, NIH, Bethesda, MD 20892 USA
Univ Mississippi, Med Ctr, Jackson, MS 39216 USA
Inst Child Hlth, London WC1N 1EH, England


[Back to Map]     

Label: Bracken-2006
Title: Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions
Journal: GENE DEVELOP, 20 (9): 1123-1136 MAY 1 2006
Citations: 43
Authors: Bracken, AP;Dietrich, N;Pasini, D;Hansen, KH;Helin, K
Addresses:
BRIC, DK-2100 Copenhagen O, Denmark
BRIC, DK-2100 Copenhagen O, Denmark
Univ Copenhagen, Fac Hlth Sci, DK-2200 Copenhagen, Denmark


[Back to Map]     

Label: Cao-2005
Title: Role of Bmi-1 and Ring1A in H2A ubiquitylation and Hox gene silencing
Journal: MOL CELL, 20 (6): 845-854 DEC 22 2005
Citations: 37
Authors: Cao, R;Tsukada, Y;Zhang, Y
Addresses:
Univ N Carolina, Howard Hughes Med Inst, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA
Univ N Carolina, Howard Hughes Med Inst, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA
Univ N Carolina, Dept Biochem & Biophys, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA


[Back to Map]     

Label: Azuara-2006
Title: Chromatin signatures of pluripotent cell lines
Journal: NAT CELL BIOL, 8 (5): 532-U189 MAY 2006
Citations: 36
Authors: Azuara, V;Perry, P;Sauer, S;Spivakov, M;Jorgensen, HF;John, RM;Gouti, M;Casanova, M;Warnes, G;Merkenschlager, M;Fisher, AG
Addresses:
Imperial Coll Sch Med, Hammersmith Hosp, MRC Clin Sci Ctr, Lymphocyte Dev Grp, London W12 0NN, England
Imperial Coll Sch Med, Hammersmith Hosp, MRC Clin Sci Ctr, Lymphocyte Dev Grp, London W12 0NN, England
Imperial Coll Sch Med, Hammersmith Hosp, MRC Clin Sci Ctr, Dev Epigenet Grp, London W12 0NN, England
Canc Res UK, FACS Lab, London WC2A 3PX, England


[Back to Map]     

Label: Grimaud-2006
Title: RNAi components are required for nuclear clustering of polycomb group response elements
Journal: CELL, 124 (5): 957-971 MAR 10 2006
Citations: 34
Authors: Grimaud, C;Bantignies, F;Pal-Bhadra, M;Ghana, P;Bhadra, U;Cavalli, G
Addresses:
Inst Human Genet, CNRS, 141 Rue Cardonille, F-34396 Montpellier 5, France
Inst Human Genet, CNRS, F-34396 Montpellier 5, France
Indian Inst Chem Technol, Dept Biol Chem, Hyderabad 500007, Andhra Pradesh, India
Ctr Cellular & Mol Biol, Hyderabad 500007, Andhra Pradesh, India


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Label: Sanchez-Eisner-2006
Title: Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to ultrabithorax
Journal: SCIENCE, 311 (5764): 1118-1123 FEB 24 2006
Citations: 30
Authors: Sanchez-Eisner, T;Gou, DW;Kremmer, E;Sauer, F
Addresses:
Univ Calif Riverside, Dept Biochem, Riverside, CA 92521 USA
Univ Calif Riverside, Dept Biochem, Riverside, CA 92521 USA
GSF Forschungszentrum Umwelt & Gesundheit GMBH, Inst Mol Immunol, D-81377 Munich, Germany


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Label: Negre-2006
Title: Chromosomal distribution of PcG proteins during drosophila development
Journal: PLOS BIOL, 4 (6): art. no.-E170 JUN 2006
Citations: 28
Authors: Negre, N;Hennetin, J;Sun, LV;Lavrov, S;Bellis, M;White, KP;Cavalli, G
Addresses:
CNRS, Inst Human Genet, Montpellier, France
CNRS, Inst Human Genet, Montpellier, France
CNRS, Ctr Rech Biochim Macromol, Montpellier, France
Yale Univ, Sch Med, Dept Genet, New Haven, CT 06510 USA


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Label: Tolhuis-2006
Title: Genome-wide profiling of PRC1 and PRC2 polycomb chromatin binding in Drosophila melanogaster
Journal: NAT GENET, 38 (6): 694-699 JUN 2006
Citations: 26
Authors: Tolhuis, B;Muijrers, I;de Wit, E;Teunissen, H;Talhout, W;van Steensel, B;van Lohuizen, M
Addresses:
Netherlands Canc Inst, Div Mol Genet, Plesmanlaan 121, NL-1066 CX Amsterdam, Netherlands
Netherlands Canc Inst, Div Mol Genet, NL-1066 CX Amsterdam, Netherlands
Netherlands Canc Inst, Ctr Biomed Genet, NL-1066 CX Amsterdam, Netherlands


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Label: Schwartz-2006
Title: Genome-wide analysis of Polycomb targets in Drosophila melanogaster
Journal: NAT GENET, 38 (6): 700-705 JUN 2006
Citations: 25
Authors: Schwartz, YB;Kahn, TG;Nix, DA;Li, XY;Bourgon, R;Biggin, M;Pirrotta, V
Addresses:
Rutgers State Univ, Dept Mol Biol & Biochem, 604 Allison Rd, Piscataway, NJ 08854 USA
Rutgers State Univ, Dept Mol Biol & Biochem, Piscataway, NJ 08854 USA
Univ Calif Berkeley, Lawrence Berkeley Lab, Berkeley Drosophila Transcript Network Project, Genom Div, Berkeley, CA 94720 USA
Univ Calif Berkeley, Dept Stat, Berkeley, CA 94720 USA


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Label: McGarvey-2006
Title: Silenced tumor suppressor genes reactivated by DNA demethylation do not return to a fully euchromatic chromatin state
Journal: CANCER RES, 66 (7): 3541-3549 APR 1 2006
Citations: 20
Authors: McGarvey, KM;Fahrner, JA;Greene, E;Martens, J;Jenuwein, T;Baylin, SB
Addresses:
Johns Hopkins Univ, Sidney Kimmel Comprehens Canc Ctr, Suite 541,1650 Orleans St, Baltimore, MD 21231 USA
Johns Hopkins Univ, Sidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Johns Hopkins Univ, Sch Med, Grad Program Cellular & Mol Med, Baltimore, MD 21231 USA
Res Inst Mol Pathol, Vienna Bioctr, A-1030 Vienna, Austria


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Label: Petruk-2006
Title: Transcription of bxd noncoding RNAs promoted by trithorax represses Ubx in cis by transcriptional interference
Journal: CELL, 127 (6): 1209-1221 DEC 15 2006
Citations: 6
Authors: Petruk, S;Sedkov, Y;Riley, KM;Hodgson, J;Schweisguth, F;Hirose, S;Jaynes, JB;Brock, HW;Mazo, A
Addresses:
Thomas Jefferson Univ, Dept Biochem, Philadelphia, PA 19107 USA
Thomas Jefferson Univ, Dept Biochem, Philadelphia, PA 19107 USA
Univ British Columbia, Dept Zool, Vancouver, BC V6T 1Z4, Canada
Ecole Normale Super, CNRS, UMR 8542, Paris, France
Natl Inst Genet, Dept Dev Genet, Mishima, Shizuoka 4118540, Japan
Grad Univ Adv Studies, Mishima, Shizuoka 4118540, Japan


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Label: Ohm-2007
Title: A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing
Journal: NAT GENET, 39 (2): 237-242 FEB 2007
Citations: 5
Authors: Ohm, JE;McGarvey, KM;Yu, X;Cheng, LZ;Schuebel, KE;Cope, L;Mohammad, HP;Chen, W;Daniel, VC;Yu, W;Berman, DM;Jenuwein, T;Pruitt, K;Sharkis, SJ;Watkins, DN;Herman, JG;Baylin, SB
Addresses:
Johns Hopkins Univ, Inst Med, Div Canc Biol, Sidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Johns Hopkins Univ, Inst Med, Div Canc Biol, Sidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Johns Hopkins Univ, Inst Med, Program Cellular & Mol Med, Baltimore, MD 21231 USA
Johns Hopkins Univ, Inst Med, Inst Cell Engn, Baltimore, MD 21231 USA
Johns Hopkins Univ, Inst Med, Biometry & Clin Trials Div, Baltimore, MD 21231 USA
Johns Hopkins Univ, Inst Med, Program Human Genet & Mol Biol, Baltimore, MD 21231 USA
Johns Hopkins Univ, Inst Med, Dept Pathol, Baltimore, MD 21231 USA
Vienna Bioctr, Res Inst Mol Pathol, A-1030 Vienna, Austria


[Back to Map]     

Label: Schwartz-2007
Title: Polycomb silencing mechanisms and the management of genomic programmes
Journal: NAT REV GENET, 8 (1): 9-22 JAN 2007
Citations: 5
Authors: Schwartz, YB;Pirrotta, V
Addresses:
Rutgers State Univ, Dept Mol Biol & Biochem, Nelson Labs, 604 Allison Rd, Piscataway, NJ 08854 USA
Rutgers State Univ, Dept Mol Biol & Biochem, Nelson Labs, Piscataway, NJ 08854 USA


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Label: Widschwendter-2007
Title: Epigenetic stem cell signature in cancer
Journal: NAT GENET, 39 (2): 157-158 FEB 2007
Citations: 5
Authors: Widschwendter, M;Fiegl, H;Egle, D;Mueller-Holzner, E;Spizzo, G;Marth, C;Weisenberger, DJ;Campan, M;Young, J;Jacobs, I;Laird, PW
Addresses:
Univ So Calif, Norris Comprehens Canc Ctr, Dept Surg, Los Angeles, CA 90033 USA
Univ So Calif, Norris Comprehens Canc Ctr, Dept Surg, Los Angeles, CA 90033 USA
Univ So Calif, Norris Comprehens Canc Ctr, Dept Biochem, Los Angeles, CA USA
Univ So Calif, Norris Comprehens Canc Ctr, Dept Biol Mol, Los Angeles, CA USA
Univ Coll London, Inst Womens Hlth, Dept Gynecol Oncol, London WC1E 6DH, England
Innsbruck Med Univ, Dept Obstet & Gynecol, Innsbruck, Austria
Innsbruck Med Univ, Dept Internal Med, Innsbruck, Austria
Queensland Inst Med Res, Mol Canc Epidemiol Lab, Brisbane, Qld 4006, Australia


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This special topic was originally featured in November 2001 and was called Embryonic Stem Cells. To view the archived Embryonic Stem Cells topic, click here.

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ESI Special Topics, November 2007
Citing URL: http://esi-topics.com/stemcells2007/rf/rf3.html

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